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Vol. 110, No. 1-4, 2005
Issue release date: 2005
Section title: Diversity of Retrotransposable Elements
Cytogenet Genome Res 110:462–467 (2005)
(DOI:10.1159/000084979)

Repbase Update, a database of eukaryotic repetitive elements

Jurka J. · Kapitonov V.V. · Pavlicek A. · Klonowski P. · Kohany O. · Walichiewicz J.
Genetic Information Research Institute, Mountain View, CA (USA)

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Article / Publication Details

First-Page Preview
Abstract of Diversity of Retrotransposable Elements

Received: 10/16/2003
Accepted: 4/6/2004
Published online: 7/21/2005

Number of Print Pages: 6
Number of Figures: 2
Number of Tables: 1

ISSN: 1424-8581 (Print)
eISSN: 1424-859X (Online)

For additional information: http://www.karger.com/CGR

Abstract

Repbase Update is a comprehensive database of repetitive elements from diverse eukaryotic organisms. Currently, it contains over 3600 annotated sequences representing different families and subfamilies of repeats, many of which are unreported anywhere else. Each sequence is accompanied by a short description and references to the original contributors. Repbase Update includes Repbase Reports, an electronic journal publishing newly discovered transposable elements, and the Transposon Pub, a web-based browser of selected chromosomal maps of transposable elements. Sequences from Repbase Update are used to screen and annotate repetitive elements using programs such as Censor and RepeatMasker. Repbase Update is available on the worldwide web at http://www.girinst.org/Repbase_Update.html.   


  

Author Contacts

Request reprints from: Dr. Jerzy Jurka, Genetic Information Research Institute
2081 Landings Drive, Mountain View, CA 94043 (USA)
telephone: +1-650-961-4480; fax: +1-650-961-4473; e-mail: jurka@girinst.org

  

Article Information

This work was supported by a grant from the National Institutes of Health (2P41 LM 006252-07A1).

Manuscript received 16 October 2003;
accepted in revised form for publication by J.-N. Volff 6 April 2004.
Number of Print Pages : 6
Number of Figures : 2, Number of Tables : 1, Number of References : 36

  

Publication Details

Cytogenetic and Genome Research

Vol. 110, No. 1-4, Year 2005 (Cover Date: 2005)

Journal Editor: H.P. Klinger, Bronx, N.Y.; M. Schmid, Würzburg
ISSN: 1424–8581 (print), 1424–859X (Online)

For additional information: http://www.karger.com/cgr


Article / Publication Details

First-Page Preview
Abstract of Diversity of Retrotransposable Elements

Received: 10/16/2003
Accepted: 4/6/2004
Published online: 7/21/2005

Number of Print Pages: 6
Number of Figures: 2
Number of Tables: 1

ISSN: 1424-8581 (Print)
eISSN: 1424-859X (Online)

For additional information: http://www.karger.com/CGR


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