Table of Contents
To view the fulltext, log-in or choose pay-per-view options:
Get Access

How repeated retroelements format genome function

von Sternberg R.a · Shapiro J.A.b
aNational Center for Biotechnology Information, National Institutes of Health, Bethesda, MD and Department of Systematic Biology, National Museum of Natural History, Smithsonian Institution, Washington, DC; bDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, IL (USA) Cytogenet Genome Res 110:108–116 (2005) (DOI:10.1159/000084942)

Abstract

Genomes operate as sophisticated information storage systems. Generic repeated signals in the DNA format expression of coding sequence files and organize additional functions essential for genome replication and accurate transmission to progeny cells. Retroelements comprise a major fraction of many genomes and contain a surprising diversity of functional signals. In this article, we summarize some features of the taxonomic distribution of retroelements, especially mammalian SINEs, tabulate functional roles documented for different classes of retroelements, and discuss their potential roles as genome organizers. In particular, the fact that certain retroelements serve as boundaries for heterochromatin domains and provide a significant fraction of scaffolding/matrix attachment regions (S/MARs) suggests that the reversed transcribed component of the genome plays a major architectonic role in higher order physical structuring. Employing an information science model, the “functionalist” perspective on repetitive DNA leads to new ways of thinking about the systemic organization of cellular genomes and provides several novel possibilities involving retroelements in evolutionarily significant genome reorganization.    

 

Individual Users: Register with Karger Login Information

Please create your User ID & Password





Contact Information











I have read the Karger Terms and Conditions and agree.


Pay-per-View Options
Direct payment This item at the regular price: USD 38.00
Payment from account With a Karger Pay-per-View account (down payment USD 150) you profit from a special rate for this and other single items.
This item at the discounted price: USD 26.50