Cytogenetic and Genome Research
Genomic organization of the DGAT2/MOGAT gene family in cattle (Bos taurus) and other mammalsWinter A. · van Eckeveld M. · Bininda-Emonds O.R.P. · Habermann F.A. · Fries R.Lehrstuhl für Tierzucht der Technischen Universität München, München (Germany)
|
|
Log in to MyKarger to check if you already have access to this content.
KAB
Buy a Karger Article Bundle (KAB) and profit from a discount!
If you would like to redeem your KAB credit, please log in.
Save over 20% compared to the individual article price.
Article / Publication Details
Published online: March 01, 2004
Issue release date: 2003
Number of Print Pages: 6
Number of Figures: 2
Number of Tables: 2
ISSN: 1424-8581 (Print)
eISSN: 1424-859X (Online)
For additional information: https://www.karger.com/CGR
Abstract
We report the cloning and initial characterization of the genes encoding DGAT2 (diacylglycerol transferase 2), MOGAT1 and MOGAT2 (monoacylglycerol transferases 1 and 2) in domestic cattle (Bos taurus). The three closely related genes belong to a gene family with at least eight members in mammals and are candidate genes for quantitative traits related to dietary fat uptake, lipid synthesis and storage. MOGAT2 and DGAT2 form a tandem and were mapped to bovine chromosome (BTA) 15q25→q26 by fluorescence in situ hybridization. MOGAT1 was localized to BTA 2q43→q44. The three genes were investigated for polymorphisms that might be associated with breeding values for milk fat percentage in the dairy breeds German Holstein, German Simmental and German Brown. All the detected polymorphisms were located outside exons or, with one exception, were silent. In MOGAT1, a missense mutation in exon 4 was found that causes a non-conservative substitution of cysteine170 (uncharged, hydrophobic) by lysine (positively charged, hydrophilic). However, allele frequency estimates from pooled DNA samples revealed no significant association of the observed polymorphisms with breeding values for milk fat percentage. A comparative analysis of chromosomal locations and exon-intron structure of the known members of the DGAT2/MOGAT gene family in humans, rodents and cattle indicates an ancient tandem duplication of the ancestor gene combined with an intron gain (or loss) in one copy. Further members of the family may have arisen by duplications of this gene tandem via two rounds of interchromosomal or genome duplications as well as further local (single) gene duplication and loss events.
© 2003 S. Karger AG, Basel
Related Articles:
References
- Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ: Basic local alignment search tool. J molec Biol 215:403–410 (1990).
- Boguski MS, Lowe TM, Tolstoshev CM: dbEST database for “expressed sequence tags”. Nature Genet 4:332–333 (1993).
- Breathnach R, Benoist C, O’Hare K, Gannon F, Chambon P: Ovalbumin gene: evidence for a leader sequence in mRNA and DNA sequences at the exon-intron boundaries. Proc natl Acad Sci, USA 75:4853–4857 (1978).
- Cao J, Lockwood J, Burn P, Shi Y: Cloning and functional characterization of a mouse intestinal acyl-CoA:monoacylglycerol acyltransferase, MGAT2. J biol Chem 278:13860–13866 (2003).
- Cases S, Smith SJ, Zheng YW, Myers HM, Lear SR, Sande E, Novak S, Collins C, Welch CB, Lusis AJ, Erickson SK, Farese RV Jr: Identification of a gene encoding an acyl CoA:diacylglycerol acyltransferase, a key enzyme in triacylglycerol synthesis. Proc natl Acad Sci, USA 95:13018–13023 (1998).
- Cases S, Stone SJ, Zhou P, Yen E, Tow B, Lardizabal KD, Voelker T, Farese RV Jr: Cloning of DGAT2, a second mammalian diacylglycerol acyltransferase, and related family members. J biol Chem 276:38870–38876 (2001).
- Cheng D, Nelson TC, Chen J, Walker SG, Wardwell-Swanson J, Meegalla R, Taub R, Billheimer JT, Ramaker M, Feder JN: Identification of acyl coenzyme A:monoacylglycerol acyltransferase 3, an intestinal specific enzyme implicated in dietary fat absorption. J biol Chem 278:13611–13614 (2003).
- Ewing B, Green P: Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res 8:186–194 (1998).
- Ewing B, Hillier L, Wendl MC, Green P: Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res 8:175–185 (1998).
-
Fries R, Durstewitz G: Digital DNA signatures for animal tagging. Nature Biotechnol 19:508 (2001).
- Frönicke L, Wienberg J: Comparative chromosome painting defines the high rate of karyotype changes between pigs and bovids. Mammal Genome 12:442–449 (2001).
- Gordon D, Abajian C, Green P: Consed: a graphical tool for sequence finishing. Genome Res 8:195–202 (1998).
- Grisart B, Coppieters W, Farnir F, Karim L, Ford C, Berzi P, Cambisano N, Mni M, Reid S, Simon P, Spelman R, Georges M, Snell R: Positional candidate cloning of a QTL in dairy cattle: identification of a missense mutation in the bovine DGAT1 gene with major effect on milk yield and composition. Genome Res 12:222–231 (2002).
- ISCNDB (2000): International System for Chromosome Nomenclature of Domestic Bovids, Di Berardino D, Di Meo GP, Gallagher DS, Hayes H, Iannuzzi L (coordinator) (eds). Cytogenet Cell Genet 92:283–299 (2001).
- Mayorek N, Grinstein I, Bar-Tana J: Triacylglycerol synthesis in cultured rat hepatocytes. The rate-limiting role of diacylglycerol acyltransferase. Eur J Biochem 182:395–400 (1989).
- Meegalla RL, Billheimer JT, Cheng D: Concerted elevation of acyl-coenzyme A:diacylglycerol acyltransferase (DGAT) activity through independent stimulation of mRNA expression of DGAT1 and DGAT2 by carbohydrate and insulin. Biochem biophys Res Commun 298:317–323 (2002).
- Nickerson DA, Tobe VO, Taylor SL: PolyPhred: automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing. Nucl Acids Res 25:2745–2751 (1997).
- Oelkers P, Behari A, Cromley D, Billheimer JT, Sturley SL: Characterization of two human genes encoding acyl coenzyme A:cholesterol acyltransferase-related enzymes. J biol Chem 273:26765–26771 (1998).
-
Reeves A, Tear J: MicroMeasure for Windows, version 3.3. (Free program, distributed by the authors via http://www.colostate.edu/Depts/Biology/MicroMeasure, 2000).
-
Rozen S, Skaletsky HJ: Primer3. Code available at http://www-genome.wi.mit.edu/genome_software/other/primer3.htm (1998).
- Smith SJ, Cases S, Jensen DR, Chen HC, Sande E, Tow B, Sanan DA, Raber J, Eckel RH, Farese RV Jr: Obesity resistance and multiple mechanisms of triglyceride synthesis in mice lacking Dgat. Nature Genet 25:87–90 (2000).
- Wain HM, Lush M, Ducluzeau F, Povey S: Genew: the Human Gene Nomenclature Database. Nucl Acids Res 30:169–171 (2002).
- Warren W, Smith TP, Rexroad CE 3rd, Fahrenkrug SC, Allison T, Shu CL, Catanese J, de Jong PJ: Construction and characterization of a new bovine bacterial artificial chromosome library with 10 genome-equivalent coverage. Mammal Genome 11:662–663 (2000).
-
Winter A, Kramer W, Werner FA, Kollers S, Kata S, Durstewitz G, Buitkamp J, Womack JE, Thaller G, Fries R: Association of a lysine-232/alanine polymorphism in a bovine gene encoding acyl-CoA:diacylglycerol acyltransferase (DGAT1) with variation at a quantitative trait locus for milk fat content. Proc natl Acad Sci, USA 20:20 (2002).
-
Yen CL, Stone SJ, Cases S, Zhou P, Farese RV Jr: Identification of a gene encoding MGAT1, a monoacylglycerol acyltransferase. Proc natl Acad Sci, USA 99:8512–8517 (2002).
- Yen CL, Farese RV Jr: MGAT2, a monoacylglycerol acyltransferase expressed in the small intestine. J biol Chem 278:18532–18537 (2003).
Article / Publication Details
Published online: March 01, 2004
Issue release date: 2003
Number of Print Pages: 6
Number of Figures: 2
Number of Tables: 2
ISSN: 1424-8581 (Print)
eISSN: 1424-859X (Online)
For additional information: https://www.karger.com/CGR
Copyright / Drug Dosage / Disclaimer
Copyright: All rights reserved. No part of this publication may be translated into other languages, reproduced or utilized in any form or by any means, electronic or mechanical, including photocopying, recording, microcopying, or by any information storage and retrieval system, without permission in writing from the publisher.Drug Dosage: The authors and the publisher have exerted every effort to ensure that drug selection and dosage set forth in this text are in accord with current recommendations and practice at the time of publication. However, in view of ongoing research, changes in government regulations, and the constant flow of information relating to drug therapy and drug reactions, the reader is urged to check the package insert for each drug for any changes in indications and dosage and for added warnings and precautions. This is particularly important when the recommended agent is a new and/or infrequently employed drug.
Disclaimer: The statements, opinions and data contained in this publication are solely those of the individual authors and contributors and not of the publishers and the editor(s). The appearance of advertisements or/and product references in the publication is not a warranty, endorsement, or approval of the products or services advertised or of their effectiveness, quality or safety. The publisher and the editor(s) disclaim responsibility for any injury to persons or property resulting from any ideas, methods, instructions or products referred to in the content or advertisements.
